PPIKB v2024 (Current version)

Datasets Description Download
Affinity Dataset (main) This dataset is the main dataset of PPIKB, which summarizes the peptide and protein affinities and other related data (sequences, affinity data, reference DOI, PMID) collected by PPIKB. Main.xlsx
Affinity Dataset (branch) This dataset summarizes peptide–protein affinities and related data (sequences, affinity data, reference DOI, PMID, corresponding complex crystal structure PDBID). It is refined based on the Affinity Dataset (main). Branch.xlsx
Peptide-protein complex This dataset includes 18,005 crystal structures of peptides and proteins (without affinity data). Complex.zip
Affinity data for peer-reviewed research papers This part of the data comes from research papers. research.xlsx
Data from public patents This part of the data comes from published patents. patent.xlsx
Structure Data PDBID, chain name, sequence, literature source, etc. of all protein and peptide structures. structure.xlsx
Drug Data DrugBank_ID, Name, Sequence, Type, Indication, etc. of Drug data. Drug.xlsx
Drug Target Data DrugBank_ID, Role, Uniprot_ID, Gene_Name, Entity_Name, Organism, Actions of Drug target data. Target.xlsx
Drug Dosage Data DrugBank_ID, Form, Route, Strength of Drug dosage data. Dosage.xlsx