General Databases

Name Description Links
RCSB PDB
(RCSB Protein Data Bank)
RCSB PDB is a freely accessible database of protein sequence and functional information, many entries being derived from genome sequencing projects.
UniProt
(The Universal Protein Resource)
UniProt is a bioinformatics resource portal accessing many scientific resources, databases and software tools in different areas of life sciences.
AlphaFold DB
(AlphaFold Protein Structure Database)
AlphaFold DB provides open access to over 200 million protein structure predictions to accelerate scientific research.
STRING The STRING database contains information from numerous sources, including experimental data, computational prediction methods and public text collections. It is freely accessible and it is regularly updated.
Lens The Lens is an online patent search facility and knowledge resource, which allows free searching of over 10 million full-text patent documents.

Specialized databases

Name Description Links
BindingDB BindingDB is a Massive, Publicly Accessible, Knowledgebase of Protein-Ligand Binding Data.
PDBbind PDBbind is a comprehensive collection of experimentally measured binding affinity data (Kd, Ki, and IC50) for the protein-ligand complexes deposited in the Protein Data Bank (PDB)
PepBDB PepBDB is a comprehensive structural database of biological peptide–protein interactions

Other Useful Resources

Name Description Links
PubMed PubMed is an openly accessible, free database which includes primarily the MEDLINE database of references and abstracts on life sciences and biomedical topics
Web of Science Web of Science(WoS; previously known as Web of Knowledge) is a paid-access platform that provides (typically via the internet) access to multiple databases that provide reference and citation data from academic journals, conference proceedings, and other documents in various academic disciplines.
Google Scholar Google Scholar is a freely accessible web search engine that indexes the full text or metadata of scholarly literature across an array of publishing formats and disciplines.
Scopus Scopus is a scientific abstract and citation database, launched by the academic publisher Elsevier.

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