PPIRE03118

Target Protein Information
Protein_Name Pol polyprotein
Protein_Sequence AGLLAGSWIPDWTFVSVPPLVTLWYTLTKEPIPGEDVYYVDGACNRNSREGKAGYITQQGKQRVEKLENTTNQQAELTAIKMALEDSGPRVNIVTDSQYA
Organism_Source Simian immunodeficiency virus agm.vervet (isolate AGM266)
Functional_Classification Viral envelope proteins
Cellular_Localization Cytoplasm
Gene_Names pol
UniProt_ID P12500
Protein-Protein Interaction Networks
Peptide Basic Information
Peptide_Name (cid:1)-basrubrin
Peptide_Sequence GADFQECMKEHSQKQHQHQG
Peptide_Length 20
Peptide_SMILES CSCC[C@H](NC(=O)[C@H](CS)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CCC(N)=O)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CC(=O)O)NC(=O)[C@H](C)NC(=O)CN)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](Cc1c[nH]cn1)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](Cc1c[nH]cn1)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](Cc1c[nH]cn1)C(=O)N[C@@H](CCC(N)=O)C(=O)NCC(=O)O
Chemical_Modification None
Cyclization_Method None
Linear/Cyclic Linear
N-terminal_Modification Free
C-terminal_Modification Free
Amino_Acid_Distribution
Peptide Physicochemical
Molecular_Weight 2353.53
Aliphatic_Index 5.00000
Aromaticity 0.05000
Average_Rotatable_Bonds 4.15000
Charge_at_pH_7 -0.78786
Isoelectric_Point 6.78296
Number_of_Hydrogen_Bond_Acceptors 37
Number_of_Hydrogen_Bond_Donors 36
Topological_Polar_Surface_Area 1101.88000
X_logP_energy -14.50270
Interaction Information
Affinity IC50=246 nM
Affinity_Assay ELISA
PDB_ID None
Type Inhibitor
Structure
Reference Information
Document_Type Research Articles
Title Antifungal peptides, a heat shock protein-like peptide, and a serine-threonine kinase-like protein from Ceylon spinach seeds.
Release_Year 2004
PMID 15245882
DOI 10.1016/j.peptides.2004.05.004