PPIRE03119

Target Protein Information
Protein_Name Pol polyprotein
Protein_Sequence AGLLAGSWIPDWTFVSVPPLVTLWYTLTKEPIPGEDVYYVDGACNRNSREGKAGYITQQGKQRVEKLENTTNQQAELTAIKMALEDSGPRVNIVTDSQYA
Organism_Source Simian immunodeficiency virus agm.vervet (isolate AGM266)
Functional_Classification Viral envelope proteins
Cellular_Localization Cytoplasm
Gene_Names pol
UniProt_ID P12500
Protein-Protein Interaction Networks
Peptide Basic Information
Peptide_Name (cid:2)-basrubrin
Peptide_Sequence KIMAKPSKFYEQLRGR
Peptide_Length 16
Peptide_SMILES CC[C@H](C)[C@H](NC(=O)[C@@H](N)CCCCN)C(=O)N[C@@H](CCSC)C(=O)N[C@@H](C)C(=O)N[C@@H](CCCCN)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CO)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)NCC(=O)N[C@@H](CCCNC(=N)N)C(=O)O
Chemical_Modification None
Cyclization_Method None
Linear/Cyclic Linear
N-terminal_Modification Free
C-terminal_Modification Free
Amino_Acid_Distribution
Peptide Physicochemical
Molecular_Weight 1952.35
Aliphatic_Index 55.00000
Aromaticity 0.12500
Average_Rotatable_Bonds 4.25000
Charge_at_pH_7 3.99802
Isoelectric_Point 11.11005
Number_of_Hydrogen_Bond_Acceptors 27
Number_of_Hydrogen_Bond_Donors 29
Topological_Polar_Surface_Area 813.74000
X_logP_energy -6.09976
Interaction Information
Affinity IC50=370 nM
Affinity_Assay ELISA
PDB_ID None
Type Inhibitor
Structure
Reference Information
Document_Type Research Articles
Title Antifungal peptides, a heat shock protein-like peptide, and a serine-threonine kinase-like protein from Ceylon spinach seeds.
Release_Year 2004
PMID 15245882
DOI 10.1016/j.peptides.2004.05.004