PPIRE03183

Target Protein Information
Protein_Name Envelope glycoprotein
Protein_Sequence MACSTLPKSPKDKIDPRDLLIPLILFLSLKGARSAAPGSSPHQVYNITWEVTNGDRETVWAISGRLYVSGRDPGLTFGIRLRYQNLGPRVPIGPNPVLAD
Organism_Source Myeloproliferative leukemia virus
Functional_Classification Viral envelope proteins
Cellular_Localization Extracellular
Gene_Names env
UniProt_ID P40932
Protein-Protein Interaction Networks
Peptide Basic Information
Peptide_Name Peptide B
Peptide_Sequence PLGVAPTKAKRRVVQREKR
Peptide_Length 19
Peptide_SMILES CC(C)C[C@H](NC(=O)[C@@H]1CCCN1)C(=O)NCC(=O)N[C@H](C(=O)N[C@@H](C)C(=O)N1CCC[C@H]1C(=O)N[C@H](C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CCCNC(=N)N)C(=O)O)C(C)C)C(C)C)[C@@H](C)O)C(C)C
Chemical_Modification None
Cyclization_Method None
Linear/Cyclic Linear
N-terminal_Modification Other
C-terminal_Modification Free
Amino_Acid_Distribution
Peptide Physicochemical
Molecular_Weight 2189.64
Aliphatic_Index 76.84211
Aromaticity 0.00000
Average_Rotatable_Bonds 4.00000
Charge_at_pH_7 5.99886
Isoelectric_Point 12.52419
Number_of_Hydrogen_Bond_Acceptors 30
Number_of_Hydrogen_Bond_Donors 37
Topological_Polar_Surface_Area 990.62000
X_logP_energy -10.30792
Interaction Information
Affinity KD=0.0588 nM
Affinity_Assay Surface plasmon resonance
PDB_ID None
Type Affinity ligand
Structure
Reference Information
Document_Type Research Articles
Title Analysis of interaction between sulfated polysaccharides and HIV oligopeptides by surface plasmon resonance.
Release_Year 2018
PMID 30521896
DOI 10.1016/j.ijbiomac.2018.12.010