PPIRE07393
Target Protein Information
| Protein_Name | None |
|---|---|
| Protein_Sequence | MGAPGVETGDFQVVKWRPGRRVRASEPSPGASNPGDTFLSLRGGSQIATETRLAGTEALPFPRLSPTSGFGSRLLSDARRPEPQRSARDQLRPPPVTRHRPRTAPLALTKSFNELGEDPGVALHEAPLPGIARHGPGRAPPRSTSGSGRPGPSLLPPPATELGKPAAGSSTTRHPAYFPTASAAPSPGARQSAGGRSSHPGAGETLPGPRWTRSGFGRGRGRAVWAKSEKGRGLGPLRREHPGPSPVWGRGGARPGGGARAREPNPEAPAAAPEQSSRVRPPCVVVLRWRRVAAQHFSRWRGGFGGLAAGHRLPKDRKMEESVNQMQPLNEKQIANSEGGYVWQVTDMNRLHRFLCFGSEGGTYCIKEQKLGLENAEALIRLIEDGRGCEVIQEIKSFSQEGRTAKQEPTLFALAICSQCSDISTKQAAFKAVPEVCRIPTHLFTFIQFKKDLKESMKCGMWGRALRKAVADWYNEKGGMALALAVTKYKQRNGWSHKDLLRLSHLKPSSEGLAIVTKYITKGWKEVHEMYKEKALSVEAEKLLKYLEAVEKVKRTKDELEVIHLIEEHRLVREHLLTNHLKSKEVWKALLQEMPLTALLRNLGKMTANSVLEPGNSEVSLVCEKLCNEKLLKKARIHPFHVLIALETYKTGHGLRGKLKWRPDEEILQALDAAFYKTFKTVEPTGKRFLLAIDVSGSMDQRVLGSVLNASTVAAAMCMVVTRTEKDSSIVAFSDEMVPCPVTTDMTLQQVLLAMSQIPAGGTDCSLPMIWAQKTNTAADVFIVFTDNETFAGSVHPAIALREYRKNMDIPAKLIVCGMTSNGFTIADPDDRGMLDMCGFDTGALDVIRSFTLDMI |
| Organism_Source | Bos taurus |
| Functional_Classification | ribonucleoproteins |
| Cellular_Localization | Nucleus |
| Gene_Names | RO60 |
| UniProt_ID | F1MIZ7 |
| Protein-Protein Interaction Networks | |
Peptide Basic Information
| Peptide_Name | Ro-MAP-482 |
|---|---|
| Peptide_Sequence | ALREYRKKMDIPAK |
| Peptide_Length | 14 |
| Peptide_SMILES | CC[C@H](C)[C@H](NC(=O)[C@H](CC(=O)O)NC(=O)[C@H](CCSC)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](Cc1ccc(O)cc1)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](C)N)C(=O)N1CCC[C@H]1C(=O)N[C@@H](C)C(=O)N[C@@H](CCCCN)C(=O)O |
| Chemical_Modification | None |
| Cyclization_Method | None |
| Linear/Cyclic | Linear |
| N-terminal_Modification | Free |
| C-terminal_Modification | Free |
| Amino_Acid_Distribution | |
|
|
|
Peptide Physicochemical
| Molecular_Weight | 1719.08 |
|---|---|
| Aliphatic_Index | 70.00000 |
| Aromaticity | 0.07143 |
| Average_Rotatable_Bonds | 4.28571 |
| Charge_at_pH_7 | 2.99846 |
| Isoelectric_Point | 10.63018 |
|---|---|
| Number_of_Hydrogen_Bond_Acceptors | 24 |
| Number_of_Hydrogen_Bond_Donors | 26 |
| Topological_Polar_Surface_Area | 729.52000 |
| X_logP_energy | -4.70666 |
Interaction Information
| Affinity | Ka=1.00E+07 1/M |
|---|---|
| Affinity_Assay | Surface plasmon resonance |
| PDB_ID | None |
| Type | Affinity ligand |
| Structure | |
Reference Information
| Document_Type | Research Articles |
|---|---|
| Title | Protein-protein interaction of the Ro-ribonucleoprotein particle using multiple antigenic peptides. |
| Release_Year | 1999 |
| PMID | 10698311 |
| DOI | 10.1016/s0161-5890(99)00095-4 |