PPIRE09860
Target Protein Information
| Protein_Name | Signal recognition particle 43 kDa protein, chloroplastic |
|---|---|
| Protein_Sequence | MQKVFLAMDTCALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEETTSSVEEAEEDDESSSSYGEVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQQQPMNE |
| Organism_Source | Arabidopsis thaliana |
| Functional_Classification | signal recognition particles |
| Cellular_Localization | Cytoplasm |
| Gene_Names | CAO |
| UniProt_ID | O22265 |
| Protein-Protein Interaction Networks | |
Peptide Basic Information
| Peptide_Name | cpSRP54pep |
|---|---|
| Peptide_Sequence | XXXXXXXXXX |
| Peptide_Length | 10 |
| Peptide_SMILES | NCC(=O)NCC(=O)NCC(=O)NCC(=O)NCC(=O)NCC(=O)NCC(=O)NCC(=O)NCC(=O)NCC(=O)O |
| Chemical_Modification | None |
| Cyclization_Method | None |
| Linear/Cyclic | Linear |
| N-terminal_Modification | Free |
| C-terminal_Modification | Free |
| Amino_Acid_Distribution | |
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Peptide Physicochemical
| Molecular_Weight | 588.53 |
|---|---|
| Aliphatic_Index | 0.00000 |
| Aromaticity | 0.00000 |
| Average_Rotatable_Bonds | 1.90000 |
| Charge_at_pH_7 | -0.00202 |
| Isoelectric_Point | 6.10000 |
|---|---|
| Number_of_Hydrogen_Bond_Acceptors | 11 |
| Number_of_Hydrogen_Bond_Donors | 11 |
| Topological_Polar_Surface_Area | 325.22000 |
| X_logP_energy | -8.92450 |
Interaction Information
| Affinity | KD=1.06 uM |
|---|---|
| Affinity_Assay | Isothermal titration calorimetry |
| PDB_ID | 2HUG |
| Type | Affinity ligand |
| Structure | |
Reference Information
| Document_Type | Research Articles |
|---|---|
| Title | Assembly of chloroplast signal recognition particle involves structural rearrangement in cpSRP43. |
| Release_Year | 2008 |
| PMID | 18586266 |
| DOI | 10.1016/j.jmb.2008.05.065 |