PPIRE10772
Target Protein Information
| Protein_Name | Gag-Pol polyprotein |
|---|---|
| Protein_Sequence | MGARNSVLRGKKADELEKVRLRPNGKKRYRLKHVVWAANELDRFGLAESLLESKEGCQKILKVLEPLVPTGSENLKSLFNTVCVIWCLHAEEKVKDTEEAKKLAQRHLVAETGTAEKMPNISRPTAPPSGKGGNFPVQQAGGNYIHVPLSPRTLNAWVKLVEEKKFGAEVVPGFQALSEGCTPYDINQMLNCVGDHQAAMQIIREIINEEAADWDAQHPIPGPLPAGQLRDPRGSDIAGTTSTVDEQIQWMYRQPNPVPVGNIYRRWIQIGLQKCVRMYNPTNILDVKQGPKESFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLIQNANPDCKLVLKGLGMNPTLEEMLTACQGVGGPSQKARLMAEALKEALTPAPIPFAAAQQRRAIRCWNCGKEGHSAKQCRAPRRQGCWKCGKSGHIMANCPERQAGFLDGPTGKAAPQLPRGPSSSGADTNSTPNRSSSGPVGEIYAAREKAERAEGETIQGGDGGLTAPRAGRDAPQRGDRGLATPQFSLWKRPVVTAFIEDQPVEVLLDTGADDSIVAGIELGDNYTPKIVGGIGGFINTKEYKNVEIKVLNKRVRATIMTGDTPINIFGRNILATLGMSLNLPVAKLDPIKVTLKPGKDGPRLKQWPLTKEKIEALKEICEKMEREGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNRVTQDFTEIQLGIPHPAGLAKKKRITVLDVGDAYFSIPLHEDFRQYTAFTLPSVNNAEPEKRYVYKVLPQGWKGSPAIFQFMMRQILEPFRKANPDVILIQYMDDILIASDRTGLEHDKVVLQLKELLNGLGFSTPDEKFQKDPPFQWMGYELWPTKWKLQKIQLPQKEIWTVNDIQKLVGVLNWAAQIYPGIKTKHLCKLIRGKMTLTEEVQWTELAEAELEENKIILSQEQEGSYYQEEEELEATVIKSQDNQWAYKIHQGERVLKVGKYAKIKNTHTNGVRLLAQVVQKIGKEALVIWGRVPKFHLPVERDTWEQWWDNYWQVTWVPEWDFVSTPPLVRLTFNLVGDPIPGTETFYTDGSCNRQSKEGKAGYVTDRGRDRVRVLEQTSNQQAELEAFAMALADSGPKVNIIVDSQYVMGIVAGQPTESENRIVNQIIEDMIKKEAVYVAWVPAHKGIGGNQEVDHLVSQGIRQVLFLEKIEPAQEEHEKYHSNIKELTHKFGIPQLVARQIVNTCAQCQQKGEAIHGQVNAEIGVWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGPNFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPAERLINMITTEQEIQFLQRKNSNFKKFQVYYREGRDQLWKGPGELLWKGDGAVIVKVGADIKVVPRRKAKIIRDYGGRQELDSSSHLEGAREDGEVA |
| Organism_Source | Human immunodeficiency virus type 2 subtype A (isolate D194) |
| Functional_Classification | aspartyl protease |
| Cellular_Localization | Cytoplasm |
| Gene_Names | gag-pol |
| UniProt_ID | P17757 |
| Protein-Protein Interaction Networks | |
Peptide Basic Information
| Peptide_Name | SYEL |
|---|---|
| Peptide_Sequence | SYEL |
| Peptide_Length | 4 |
| Peptide_SMILES | CC(C)C[C@H](NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](Cc1ccc(O)cc1)NC(=O)[C@@H](N)CO)C(=O)O |
| Chemical_Modification | None |
| Cyclization_Method | None |
| Linear/Cyclic | Linear |
| N-terminal_Modification | Free |
| C-terminal_Modification | Free |
| Amino_Acid_Distribution | |
|
|
|
Peptide Physicochemical
| Molecular_Weight | 510.54 |
|---|---|
| Aliphatic_Index | 97.50000 |
| Aromaticity | 0.25000 |
| Average_Rotatable_Bonds | 3.75000 |
| Charge_at_pH_7 | -1.00109 |
| Isoelectric_Point | 3.84998 |
|---|---|
| Number_of_Hydrogen_Bond_Acceptors | 8 |
| Number_of_Hydrogen_Bond_Donors | 8 |
| Topological_Polar_Surface_Area | 228.38000 |
| X_logP_energy | -1.29580 |
Interaction Information
| Affinity | IC50=37 uM |
|---|---|
| Affinity_Assay | Enzyme Inhibition Kinetics |
| PDB_ID | None |
| Type | Inhibitor |
| Structure | |
Reference Information
| Document_Type | Research Articles |
|---|---|
| Title | The inhibition of human immunodeficiency virus proteases by 'interface peptides'. |
| Release_Year | 1996 |
| PMID | 8783807 |
| DOI | 10.1016/0166-3542(96)00940-0 |