PPIRE11413

Target Protein Information
Protein_Name Peroxisomal membrane protein PEX13
Protein_Sequence MSSTAVPRPKPWETSASLEEPQRNAQSLSAMMTSNQQDSRPTEESNNSNSASESAPEVLPRPAALNSSGTYGESNTIPGIYGNSNYGIPYDNNPYSMNSIYGNSIGRYGYGGSYYGNNYGSFYGGGYGAGAGYGMNNGSGLGESTKATFQLIESLIGAVTGFAQMLESTYMATHNSFFTMISVAEQFGNLKEMLGSFFGIFAIMKFLKKILYRATKGRLGIPPKNFAESEGSKNKLIEDFQKFNDSGTINSNEKATRRKISWKPLLFFLMAVFGFPYLLNKFITKLQTSGTIRASQGNGSEPIDPSKLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIKRRKKIEHVDDETRTH
Organism_Source Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Functional_Classification adaptor proteins
Cellular_Localization Cytoplasm
Gene_Names PEX13
UniProt_ID P80667
Protein-Protein Interaction Networks
Peptide Basic Information
Peptide_Name Pex14p peptide
Peptide_Sequence EAMPPTLPHRDWKD
Peptide_Length 14
Peptide_SMILES CSCC[C@H](NC(=O)[C@H](C)NC(=O)[C@@H](N)CCC(=O)O)C(=O)N1CCC[C@H]1C(=O)N1CCC[C@H]1C(=O)N[C@H](C(=O)N[C@@H](CC(C)C)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1c[nH]cn1)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](CC(=O)O)C(=O)O)[C@@H](C)O
Chemical_Modification None
Cyclization_Method None
Linear/Cyclic Linear
N-terminal_Modification Free
C-terminal_Modification Free
Amino_Acid_Distribution
Peptide Physicochemical
Molecular_Weight 1692.91
Aliphatic_Index 35.00000
Aromaticity 0.07143
Average_Rotatable_Bonds 3.50000
Charge_at_pH_7 -0.90874
Isoelectric_Point 5.51936
Number_of_Hydrogen_Bond_Acceptors 23
Number_of_Hydrogen_Bond_Donors 22
Topological_Polar_Surface_Area 679.77000
X_logP_energy -4.68453
Interaction Information
Affinity KD=44 uM
Affinity_Assay NMR spectroscopy
PDB_ID None
Type Affinity ligand
Structure
Reference Information
Document_Type Research Articles
Title Topography for independent binding of alpha-helical and PPII-helical ligands to a peroxisomal SH3 domain.
Release_Year 2002
PMID 12453410
DOI 10.1016/s1097-2765(02)00749-9