PPIRE12901

Target Protein Information
Protein_Name THO complex subunit 4
Protein_Sequence MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAVQAAARVNRGGGPMRNRPAIARGAAGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDTQRRPAQSINRGGMTRNRGSGGFGGGGTRRGTRGGSRGRGRGTGRNSKQQLSAEELDAQLDAYNARMDTS
Organism_Source Mus musculus
Functional_Classification nuclear export factors
Cellular_Localization Nucleus
Gene_Names Alyref
UniProt_ID O08583
Protein-Protein Interaction Networks
Peptide Basic Information
Peptide_Name HVS_ORF57_103-120_R111A
Peptide_Sequence SCKTSWADAVREAAAQRR
Peptide_Length 18
Peptide_SMILES CC(C)[C@H](NC(=O)[C@H](C)NC(=O)[C@H](CC(=O)O)NC(=O)[C@H](C)NC(=O)[C@H](Cc1c[nH]c2ccccc12)NC(=O)[C@H](CO)NC(=O)[C@@H](NC(=O)[C@H](CCCCN)NC(=O)[C@H](CS)NC(=O)[C@@H](N)CO)[C@@H](C)O)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCNC(=N)N)C(=O)O
Chemical_Modification None
Cyclization_Method None
Linear/Cyclic Linear
N-terminal_Modification Free
C-terminal_Modification Free
Amino_Acid_Distribution
Peptide Physicochemical
Molecular_Weight 2006.23
Aliphatic_Index 43.88889
Aromaticity 0.05556
Average_Rotatable_Bonds 3.66667
Charge_at_pH_7 1.93793
Isoelectric_Point 9.82337
Number_of_Hydrogen_Bond_Acceptors 30
Number_of_Hydrogen_Bond_Donors 37
Topological_Polar_Surface_Area 963.91000
X_logP_energy -13.06159
Interaction Information
Affinity KD=0.025 mM
Affinity_Assay NMR chemical shift titration
PDB_ID 2KT5
Type Inhibitor
Structure
Reference Information
Document_Type Research Articles
Title Structural basis for the recognition of cellular mRNA export factor REF by herpes viral proteins HSV-1 ICP27 and HVS ORF57.
Release_Year 2011
PMID 21253573
DOI 10.1371/journal.ppat.1001244