PPIRE15157
Target Protein Information
| Protein_Name | Antithrombin-III |
|---|---|
| Protein_Sequence | MYSNVIGTVTSGKRKVYLLSLLLIGFWDCVTCHGSPVDICTAKPRDIPMNPMCIYRSPEKKATEDEGSEQKIPEATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMGRVANPCVK |
| Organism_Source | Homo sapiens |
| Functional_Classification | serine protease inhibitor |
| Cellular_Localization | Extracellular |
| Gene_Names | SERPINC1 |
| UniProt_ID | P01008 |
| Protein-Protein Interaction Networks | |
Peptide Basic Information
| Peptide_Name | SPb |
|---|---|
| Peptide_Sequence | GGGGSXDYXSXDYXG |
| Peptide_Length | 15 |
| Peptide_SMILES | NCC(=O)NCC(=O)NCC(=O)NCC(=O)N[C@@H](CO)C(=O)NCC(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)NCC(=O)N[C@@H](CO)C(=O)NCC(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)NCC(=O)NCC(=O)O |
| Chemical_Modification | X6=O-sulfotyrosine; X8=O-sulfotyrosine; X10=O-sulfotyrosine; X12=O-sulfotyrosine |
| Cyclization_Method | None |
| Linear/Cyclic | Linear |
| N-terminal_Modification | Free |
| C-terminal_Modification | Free |
| Amino_Acid_Distribution | |
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Peptide Physicochemical
| Molecular_Weight | 1262.17 |
|---|---|
| Aliphatic_Index | 0.00000 |
| Aromaticity | 0.13333 |
| Average_Rotatable_Bonds | 2.60000 |
| Charge_at_pH_7 | -2.00282 |
| Isoelectric_Point | 3.49188 |
|---|---|
| Number_of_Hydrogen_Bond_Acceptors | 22 |
| Number_of_Hydrogen_Bond_Donors | 22 |
| Topological_Polar_Surface_Area | 626.24000 |
| X_logP_energy | -12.30130 |
Interaction Information
| Affinity | KD=6.9 mM |
|---|---|
| Affinity_Assay | Surface Plasmon Resonance |
| PDB_ID | None |
| Type | Affinity ligand |
| Structure | |
Reference Information
| Document_Type | Research Articles |
|---|---|
| Title | Heparin-mimetic sulfated peptides with modulated affinities for heparin-binding peptides and growth factors |
| Release_Year | 2007 |
| PMID | 17916399 |
| DOI | 10.1016/j.peptides.2007.08.010 |