PPIRE17213

Target Protein Information
Protein_Name None
Protein_Sequence MGPGALFLLLSGTLALTGTQAGPHSLSYFYTAVSRPDRGEPRFIAVGYVDDTQFVRFDNYAPNPRMEPRVPWIQQEGQDYWDEETRKVKDNAQTLRVGLNTLRGYYNQSEAGSHTLQSMFGCYLGPDGLLLHGYRQDAYDGADYIALNEDLRSWTAADMAAQISKRKWEAADEAERMRSYLQGRCVEGLRRYLQMGKDTLQRADPPKTHVTRHPSSDLGVTLRCWALGFYPKEISLTWQREGQDQSQDMELVETRPSGDGTFQKWAALVVPPGEEQSYTCHVQHEGLQEPLTLRWDPAQPPVPMVGITVGLVLVLVAGAMVAGVVIWRKTRSGEKGGSYTQAAGSDSAQGSDVSLTKDPRV
Organism_Source Sus scrofa
Functional_Classification MHC class1 molecules
Cellular_Localization Plasma membrane
Gene_Names SLA1
UniProt_ID Q9TQ85
Protein-Protein Interaction Networks
Peptide Basic Information
Peptide_Name TVYNGTSKY
Peptide_Sequence TVYNGTSKY
Peptide_Length 9
Peptide_SMILES CC(C)[C@H](NC(=O)[C@@H](N)[C@@H](C)O)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)N[C@@H](CC(N)=O)C(=O)NCC(=O)N[C@H](C(=O)N[C@@H](CO)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)O)[C@@H](C)O
Chemical_Modification None
Cyclization_Method None
Linear/Cyclic Linear
N-terminal_Modification Free
C-terminal_Modification Free
Amino_Acid_Distribution
Peptide Physicochemical
Molecular_Weight 1032.12
Aliphatic_Index 32.22222
Aromaticity 0.22222
Average_Rotatable_Bonds 3.44444
Charge_at_pH_7 0.99599
Isoelectric_Point 9.14560
Number_of_Hydrogen_Bond_Acceptors 17
Number_of_Hydrogen_Bond_Donors 17
Topological_Polar_Surface_Area 466.38000
X_logP_energy -5.78100
Interaction Information
Affinity KD=87 nM
Affinity_Assay ELISA
PDB_ID None
Type Affinity ligand
Structure
Reference Information
Document_Type Research Articles
Title Identification of peptides from foot-and-mouth disease virus structural proteins bound by class I swine leukocyte antigen (SLA) alleles SLA-1*0401 and SLA-2*0401
Release_Year 2012
PMID 22984928
DOI 10.1111/j.1365-2052.2012.02400.x