PPIPT00525

Target Protein Information
Protein_Name MHC class I antigen
Protein_Sequence GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWETAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRT
Organism_Source Homo sapiens
Functional_Classification MHC class I antigen
Cellular_Localization Plasma membrane
Gene_Names HLA-A2
UniProt_ID Q95387
Protein-Protein Interaction Networks
Peptide Basic Information
Peptide_Name FPFKYAAAW
Peptide_Sequence FPFKYAAAW
Peptide_Length 9
Peptide_SMILES C[C@H](NC(=O)[C@H](C)NC(=O)[C@H](Cc1ccc(O)cc1)NC(=O)[C@H](CCCCN)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@@H]1CCCN1C(=O)[C@@H](N)Cc1ccccc1)C(=O)N[C@@H](C)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)O
Chemical_Modification None
Cyclization_Method None
Linear/Cyclic Cyclic
N-terminal_Modification Free
C-terminal_Modification Free
Amino_Acid_Distribution
Peptide Physicochemical
Molecular_Weight 1100.28
Aliphatic_Index 33.33333
Aromaticity 0.44444
Average_Rotatable_Bonds 3.11111
Charge_at_pH_7 0.99684
Isoelectric_point 9.29830
Number_of_Hydrogen_Bond_Acceptors 12
Number_of_Hydrogen_Bond_Donors 12
Topological_Polar_Surface_Area 349.37000
X_logP_energy 1.12930
Interaction Information
Affinity IC50=11 nM
Affinity_Assay competition binding assay
PDB_ID None
Type Affinity ligand
Structure
Reference Information
Document_Type Patent
Title HLA BINDING PEPTIDES AND THEIR USES
Release_Year 2006
Patent_ID US20060079453A1