PPIPT01563

Target Protein Information
Protein_Name Endonuclease 8-like 3
Protein_Sequence MVEGPGCTLNGEKIRARVLPGQAVTGVRGSALRSLQGRALRLAASTVVVSPQAAALNNDSSQNVLSLFNGYVYSGVETLGKELFMYFGPKALRIHFGMKGFIMINPLEYKYKNGASPVLEVQLTKDLICFFDSSVELRNSMESQQRIRMMKELDVCSPEFSFLRAESEVKKQKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQIHHLMKMIRDFSILFYRCRKAGLALSKHYKVYKRPNCGQCHCRITVCRFGDNNRMTYFCPHCQKENPQHVDICKLPTRNTIISWTSSRVDHVMDSVARKSEEHWTCVVCTLINKPSSKACDACLTSRPIDSVLKSEENSTVFSHLMKYPCNTFGKPHTEVKINRKTAFGTTTLVLTDFSNKSSTLERKTKQNQILDEEFQNSPPASVCLNDIQHPSKKTTNDITQPSSKVNISPTISSESKLFSPAHKKPKTAQYSSPELKSCNPGYSNSELQINMTDGPRTLNPDSPRCSKHNRLCILRVVGKDGENKGRQFYACPLPREAQCGFFEWADLSFPFCNHGKRSTMKTVLKIGPNNGKNFFVCPLGKEKQCNFFQWAENGPGIKIIPGC
Organism_Source Homo sapiens
Functional_Classification DNA glycosylase / endonuclease
Cellular_Localization Nucleus
Gene_Names NEIL3
UniProt_ID Q8TAT5
Protein-Protein Interaction Networks
Peptide Basic Information
Peptide_Name NEIL3-A24-9-362
Peptide_Sequence KYPCNTFGK
Peptide_Length 9
Peptide_SMILES C[C@@H](O)[C@H](NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CS)NC(=O)[C@@H]1CCCN1C(=O)[C@H](Cc1ccc(O)cc1)NC(=O)[C@@H](N)CCCCN)C(=O)N[C@@H](Cc1ccccc1)C(=O)NCC(=O)N[C@@H](CCCCN)C(=O)O
Chemical_Modification None
Cyclization_Method None
Linear/Cyclic Cyclic
N-terminal_Modification Free
C-terminal_Modification Free
Amino_Acid_Distribution
Peptide Physicochemical
Molecular_Weight 1057.23
Aliphatic_Index 0.00000
Aromaticity 0.22222
Average_Rotatable_Bonds 3.55556
Charge_at_pH_7 1.93457
Isoelectric_point 9.40577
Number_of_Hydrogen_Bond_Acceptors 16
Number_of_Hydrogen_Bond_Donors 15
Topological_Polar_Surface_Area 422.92000
X_logP_energy -3.95070
Interaction Information
Affinity KD=86 nM
Affinity_Assay NetMHC3.0 binding prediction
PDB_ID None
Type Affinity ligand
Structure
Reference Information
Document_Type Patent
Title NEIL3 PEPTIDES AND VACCINES INCLUDING THE SAME
Release_Year 2012
Patent_ID US201200938.45A1