PPIST11643

Protein Information
Protein_Chain B[auth L]; E[auth M]/A[auth H]; D[auth I]
Protein_Sequence SYELTQPPSVSVSPGQTARITCSGDELPKKYAYWYQEKSGQAPVLIIYEDSKRPSGIPERFSGSSSGTMATLTISGAQVEDEADYYCFSTDSSGDLWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS/QVQLVQSGAEVKKPGASVKVSCKASGYTFTNYAIHWVRQAPGHRLEWMGWINGGDGNTKYSQKLQGRVTITRDTSASTAYMELSSLRSEDSAVYYCMRAYYYGSRGLVDDALDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
Peptide Information
Peptide_Chain C[auth P]; F[auth Q]
Peptide_Sequence NNTKKGIAIGPGRTLYAREK
Peptide_Length 20
Non-standard residues No
Interaction Information
PDB_ID 6DB5
Method X-RAY DIFFRACTION
Resolution 2.60 angstrom
Structure
Protein-peptide residue interaction
Residues
Acidic
Polar
Basic
Aliphatic
Aromatic
Interactions
HBond
WaterBridge
Hydrophobic
SaltBridge
PiStack
PiCation
Halogen
Metal
Interaction_xlsx Download interaction table (.xlsx)
Reference Information
Title Structural Comparison of Human Anti-HIV-1 gp120 V3 Monoclonal Antibodies of the Same Gene Usage Induced by Vaccination and Chronic Infection.
Release_Year 2018
PMID 29997214
DOI 10.1128/JVI.00641-18