PPIST12563

Protein Information
Protein_Chain AA[auth a]; BB[auth b]; DA[auth c]; DB[auth d]; FA[auth e]; FB[auth f]; HA[auth g]; HB[auth h]; JA[auth i]; LA[auth j]; NA[auth k]; PA[auth l]; RA[auth m]; TA[auth n]; U[auth o]; VA[auth p]; W[auth q]; XA[auth r]; Y[auth s]; ZA[auth t]/AB[auth A]; BA[auth B]; CA[auth C]; CB[auth D]; EA[auth E]; EB[auth F]; GA[auth G]; IA[auth H]; KA[auth I]; MA[auth J]; OA[auth K]; QA[auth L]; SA[auth M]; T[auth N]; UA[auth O]; V[auth P]; WA[auth Q]; X[auth R]; YA[auth S]; Z[auth T]
Protein_Sequence MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM/GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYGCDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEATLRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE
Peptide Information
Peptide_Chain A[auth 1]; B[auth 2]; C[auth 3]; D[auth 4]; E[auth 5]; F[auth 6]; GB[auth 8]; G[auth 7]; H[auth U]; I[auth V]; J[auth W]; K[auth X]; L[auth Y]; M[auth Z]; N[auth u]; O[auth v]; P[auth w]; Q[auth x]; R[auth y]; S[auth z]
Peptide_Sequence YVLDHLIVV
Peptide_Length 9
Non-standard residues No
Interaction Information
PDB_ID 6NCA
Method X-RAY DIFFRACTION
Resolution 3.30 angstrom
Structure
Protein-peptide residue interaction
Residues
Acidic
Polar
Basic
Aliphatic
Aromatic
Interactions
HBond
WaterBridge
Hydrophobic
SaltBridge
PiStack
PiCation
Halogen
Metal
Interaction_xlsx Download interaction table (.xlsx)
Reference Information
Title CDR3 alpha drives selection of the immunodominant Epstein Barr virus (EBV) BRLF1-specific CD8 T cell receptor repertoire in primary infection.
Release_Year 2019
PMID 31765434
DOI 10.1371/journal.ppat.1008122